Since Guardiola's arrival at the Etihad Stadium, Aguero has spent periods on the bench with Gabriel Jesus being preferred to the Argentina international.
However, Aguero has claimed that his relationship with his manager is "really good" and reiterated that he wishes to remain at City until the end of the 2019-2020 campaign.
The 30-year-old told El Chiringuito de Jugones: "It is really good, we were very clear when we saw each other. I try to do my job and he does his job. Obviously, he is always fine with me. I am happy how the season ended.
"The club is happy, and I am happy in the club. I hope to stay until the end of my contract."
This season, Aguero scored 25 goals in 32 appearances in the Premier League and Champions League.