The French side are reported to be keen on selling the 27-year-old to Shakhtar Donetsk this summer.
However, Gomis is clear that he wants to decide where he will be playing during the next campaign.
"I will choose where I play next season," the France international is quoted as saying by Sky Sports News. "It sounds like Lyon have already made their choice, but I haven't."
Gomis joined Lyon from Saint-Etienne in 2009.