"Tim Bresnan is an outstanding young man with a very good disciplinary record," Sky Sports News quotes Flower as saying. "To be quite honest, I think in this instance it is a harsh judgment - in that it was quite a frustrating over for him.
"I have no problem at all with Tim's behaviour. He has an outstanding conduct record.
"They've made their judgement, and whether or not we disagree with it is by the by. I think we all move on now."
England resume their five-match ODI against India with the fourth fixture on Sunday.